9 #ifndef CMZN_FIELDIMAGEPROCESSING_HPP__    10 #define CMZN_FIELDIMAGEPROCESSING_HPP__    12 #include "opencmiss/zinc/field.hpp"    13 #include "opencmiss/zinc/fieldimageprocessing.h"    14 #include "opencmiss/zinc/fieldmodule.hpp"    20 class FieldImagefilterBinaryDilate : 
public Field
    34     explicit FieldImagefilterBinaryDilate(cmzn_field_id field_id) : Field(field_id)
    37     friend FieldImagefilterBinaryDilate
    39             int radius, 
double dilate_value);
    43     FieldImagefilterBinaryDilate() : Field(0)
    47 class FieldImagefilterBinaryErode : 
public Field
    61     explicit FieldImagefilterBinaryErode(cmzn_field_id field_id) : Field(field_id)
    64     friend FieldImagefilterBinaryErode
    66             int radius, 
double erode_value);
    70     FieldImagefilterBinaryErode() : Field(0)
    89         Field(reinterpret_cast<cmzn_field_id>(field_imagefilter_binary_threshold_id))
    99         return cmzn_field_imagefilter_binary_threshold_get_lower_threshold(
   100             reinterpret_cast<cmzn_field_imagefilter_binary_threshold_id>(
id));
   111         return cmzn_field_imagefilter_binary_threshold_set_lower_threshold(
   112             reinterpret_cast<cmzn_field_imagefilter_binary_threshold_id>(
id),
   123         return cmzn_field_imagefilter_binary_threshold_get_upper_threshold(
   124             reinterpret_cast<cmzn_field_imagefilter_binary_threshold_id>(
id));
   135         return cmzn_field_imagefilter_binary_threshold_set_upper_threshold(
   136             reinterpret_cast<cmzn_field_imagefilter_binary_threshold_id>(
id),
   158             double variance, 
double maximumError, 
double upperThreshold, 
double lowerThreshold);
   184               double lowerThreshold, 
double upperThreshold, 
double replaceValue,
   185               int dimension, 
int seedPointsCount, 
const double *seedPoints);
   212             double timeStep, 
double conductance, 
int numIterations);
   235         Field(reinterpret_cast<cmzn_field_id>(field_imagefilter_discrete_gaussian_id))
   246         return cmzn_field_imagefilter_discrete_gaussian_get_variance(
   247             reinterpret_cast<cmzn_field_imagefilter_discrete_gaussian_id>(
id));
   262         return cmzn_field_imagefilter_discrete_gaussian_set_variance(
   263             reinterpret_cast<cmzn_field_imagefilter_discrete_gaussian_id>(
id),
   275         return cmzn_field_imagefilter_discrete_gaussian_get_max_kernel_width(
   276             reinterpret_cast<cmzn_field_imagefilter_discrete_gaussian_id>(
id));
   290         return cmzn_field_imagefilter_discrete_gaussian_set_max_kernel_width(
   291             reinterpret_cast<cmzn_field_imagefilter_discrete_gaussian_id>(
id),
   311         Field(reinterpret_cast<cmzn_field_id>(field_imagefilter_histogram_id))
   326         return cmzn_field_imagefilter_histogram_get_compute_minimum_values(
   327             reinterpret_cast<cmzn_field_imagefilter_histogram_id>(
id),
   328             valuesCount, valuesOut);
   345         return cmzn_field_imagefilter_histogram_set_compute_minimum_values(
   346             reinterpret_cast<cmzn_field_imagefilter_histogram_id>(
id),
   347             valuesCount, valuesIn);
   362         return cmzn_field_imagefilter_histogram_get_compute_maximum_values(
   363             reinterpret_cast<cmzn_field_imagefilter_histogram_id>(
id),
   364             valuesCount, valuesOut);
   381         return cmzn_field_imagefilter_histogram_set_compute_maximum_values(
   382             reinterpret_cast<cmzn_field_imagefilter_histogram_id>(
id),
   383             valuesCount, valuesIn);
   399         return cmzn_field_imagefilter_histogram_get_number_of_bins(
   400             reinterpret_cast<cmzn_field_imagefilter_histogram_id>(
id),
   401             valuesCount, valuesOut);
   421         return cmzn_field_imagefilter_histogram_set_number_of_bins(
   422             reinterpret_cast<cmzn_field_imagefilter_histogram_id>(
id),
   423             valuesCount, valuesIn);
   436         return cmzn_field_imagefilter_histogram_get_marginal_scale(
   437             reinterpret_cast<cmzn_field_imagefilter_histogram_id>(
id));
   451         return cmzn_field_imagefilter_histogram_set_marginal_scale(
   452             reinterpret_cast<cmzn_field_imagefilter_histogram_id>(
id),
   502             double outputMin, 
double outputMax);
   528             int radiusSizesCount, 
const int *radiusSizesIn);
   554             double min, 
double max, 
double alpha, 
double beta);
   578         Field(reinterpret_cast<cmzn_field_id>(field_imagefilter_threshold_id))
   587         CONDITION_INVALID = CMZN_FIELD_IMAGEFILTER_THRESHOLD_CONDITION_INVALID,
   589         CONDITION_ABOVE = CMZN_FIELD_IMAGEFILTER_THRESHOLD_CONDITION_ABOVE,
   591         CONDITION_BELOW = CMZN_FIELD_IMAGEFILTER_THRESHOLD_CONDITION_BELOW,
   594         CONDITION_OUTSIDE = CMZN_FIELD_IMAGEFILTER_THRESHOLD_CONDITION_OUTSIDE
   605         return static_cast<Condition>(cmzn_field_imagefilter_threshold_get_condition(
   606             reinterpret_cast<cmzn_field_imagefilter_threshold_id>(
id)));
   619         return cmzn_field_imagefilter_threshold_set_condition(
   620             reinterpret_cast<cmzn_field_imagefilter_threshold_id>(
id),
   621             static_cast<cmzn_field_imagefilter_threshold_condition>(condition));
   631         return cmzn_field_imagefilter_threshold_get_outside_value(
   632             reinterpret_cast<cmzn_field_imagefilter_threshold_id>(
id));
   643         return cmzn_field_imagefilter_threshold_set_outside_value(
   644             reinterpret_cast<cmzn_field_imagefilter_threshold_id>(
id), outsideValue);
   654         return cmzn_field_imagefilter_threshold_get_lower_threshold(
   655             reinterpret_cast<cmzn_field_imagefilter_threshold_id>(
id));
   668         return cmzn_field_imagefilter_threshold_set_lower_threshold(
   669             reinterpret_cast<cmzn_field_imagefilter_threshold_id>(
id), lowerValue);
   679         return cmzn_field_imagefilter_threshold_get_upper_threshold(
   680             reinterpret_cast<cmzn_field_imagefilter_threshold_id>(
id));
   693         return cmzn_field_imagefilter_threshold_set_upper_threshold(
   694             reinterpret_cast<cmzn_field_imagefilter_threshold_id>(
id), upperValue);
   701         int radius, 
double dilate_value)
   704         cmzn_fieldmodule_create_field_imagefilter_binary_dilate(
id, sourceField.
getId(),
   705             radius, dilate_value));
   710         int radius, 
double erode_value)
   713         cmzn_fieldmodule_create_field_imagefilter_binary_erode(
id, sourceField.
getId(),
   714             radius, erode_value));
   721         cmzn_fieldmodule_create_field_imagefilter_binary_threshold(
id, sourceField.
getId())));
   731         double variance, 
double maximumError, 
double upperThreshold, 
double lowerThreshold)
   734         cmzn_fieldmodule_create_field_imagefilter_canny_edge_detection(
   735             id, sourceField.
getId(),
   736             variance, maximumError, upperThreshold, lowerThreshold));
   741           double lowerThreshold, 
double upperThreshold, 
double replaceValue,
   742           int dimension, 
int seedPointsCount, 
const double *seedPoints)
   745         cmzn_fieldmodule_create_field_imagefilter_connected_threshold(
id, sourceField.
getId(),
   746         lowerThreshold, upperThreshold, replaceValue, seedPointsCount, dimension, seedPoints));
   751         double timeStep, 
double conductance, 
int numIterations)
   754         cmzn_fieldmodule_create_field_imagefilter_curvature_anisotropic_diffusion(
id, sourceField.
getId(),
   755             timeStep, conductance, numIterations));
   762         cmzn_fieldmodule_create_field_imagefilter_discrete_gaussian(
id, sourceField.
getId())));
   775         cmzn_fieldmodule_create_field_imagefilter_gradient_magnitude_recursive_gaussian(
id,
   776             sourceField.
getId(), sigma));
   783         cmzn_fieldmodule_create_field_imagefilter_histogram(
id, sourceField.
getId())));
   793         double outputMin, 
double outputMax)
   796         cmzn_fieldmodule_create_field_imagefilter_rescale_intensity(
id,
   797             sourceField.
getId(), outputMin, outputMax));
   801     int radiusSizesCount, 
const int *radiusSizesIn)
   804         id, sourceField.
getId(), radiusSizesCount, radiusSizesIn));
   809         double min, 
double max, 
double alpha, 
double beta)
   812         cmzn_fieldmodule_create_field_imagefilter_sigmoid(
id,
   813             sourceField.
getId(), min, max, alpha, beta));
   820         cmzn_fieldmodule_create_field_imagefilter_threshold(
   821             id, sourceField.
getId())));
 A field performing ITK binary dilate image filter on scalar source field image. 
Definition: fieldimageprocessing.hpp:30
 
int getMaxKernelWidth()
Definition: fieldimageprocessing.hpp:273
 
FieldImagefilterCannyEdgeDetection createFieldImagefilterCannyEdgeDetection(const Field &sourceField, double variance, double maximumError, double upperThreshold, double lowerThreshold)
Definition: fieldimageprocessing.hpp:730
 
FieldImagefilterMean createFieldImagefilterMean(const Field &sourceField, int radiusSizesCount, const int *radiusSizesIn)
Definition: fieldimageprocessing.hpp:800
 
FieldImagefilterDiscreteGaussian castImagefilterDiscreteGaussian()
Definition: fieldimageprocessing.hpp:765
 
int setOutsideValue(double outsideValue)
Definition: fieldimageprocessing.hpp:641
 
FieldImagefilterDiscreteGaussian createFieldImagefilterDiscreteGaussian(const Field &sourceField)
Definition: fieldimageprocessing.hpp:759
 
Base field type: an abstraction of a mathematical field. 
Definition: field.hpp:51
 
FieldImagefilterBinaryDilate createFieldImagefilterBinaryDilate(const Field &sourceField, int radius, double dilate_value)
Definition: fieldimageprocessing.hpp:700
 
int setComputeMaximumValues(int valuesCount, const double *valuesIn)
Definition: fieldimageprocessing.hpp:379
 
double getVariance()
Definition: fieldimageprocessing.hpp:244
 
int setLowerThreshold(double lowerThreshold)
Definition: fieldimageprocessing.hpp:109
 
FieldImagefilterCurvatureAnisotropicDiffusion createFieldImagefilterCurvatureAnisotropicDiffusion(const Field &sourceField, double timeStep, double conductance, int numIterations)
Definition: fieldimageprocessing.hpp:750
 
int setVariance(double variance)
Definition: fieldimageprocessing.hpp:260
 
int setCondition(Condition condition)
Definition: fieldimageprocessing.hpp:617
 
int getNumberOfBins(int valuesCount, int *valuesOut)
Definition: fieldimageprocessing.hpp:397
 
FieldImagefilterBinaryErode createFieldImagefilterBinaryErode(const Field &sourceField, int radius, double erode_value)
Definition: fieldimageprocessing.hpp:709
 
FieldImagefilterHistogram createFieldImagefilterHistogram(const Field &sourceField)
Definition: fieldimageprocessing.hpp:780
 
FieldImagefilterRescaleIntensity createFieldImagefilterRescaleIntensity(const Field &sourceField, double outputMin, double outputMax)
Definition: fieldimageprocessing.hpp:792
 
double getLowerThreshold()
Definition: fieldimageprocessing.hpp:97
 
double getUpperThreshold()
Definition: fieldimageprocessing.hpp:677
 
Image processing derived field type performing the ITK discrete gaussian filter. 
Definition: fieldimageprocessing.hpp:226
 
A field returning result of ITK canny edge detection filter on the source field image. 
Definition: fieldimageprocessing.hpp:149
 
int setNumberOfBins(int valuesCount, const int *valuesIn)
Definition: fieldimageprocessing.hpp:419
 
A field performing ITK connected threshold image filter on scalar source field image. 
Definition: fieldimageprocessing.hpp:174
 
cmzn_field_id getId() const 
Definition: field.hpp:103
 
Condition
Definition: fieldimageprocessing.hpp:585
 
double getOutsideValue()
Definition: fieldimageprocessing.hpp:629
 
int setUpperThreshold(double upperValue)
Definition: fieldimageprocessing.hpp:691
 
FieldImagefilterConnectedThreshold createFieldImagefilterConnectedThreshold(const Field &sourceField, double lowerThreshold, double upperThreshold, double replaceValue, int dimension, int seedPointsCount, const double *seedPoints)
Definition: fieldimageprocessing.hpp:740
 
A field performing ITK mean image filter on source_field image. 
Definition: fieldimageprocessing.hpp:518
 
int setUpperThreshold(double upperThreshold)
Definition: fieldimageprocessing.hpp:133
 
FieldImagefilterHistogram castImagefilterHistogram()
Definition: fieldimageprocessing.hpp:786
 
Image processing derived field type performing the ITK threshold filter. 
Definition: fieldimageprocessing.hpp:569
 
double getMarginalScale()
Definition: fieldimageprocessing.hpp:434
 
A field performing ITK curvature anisotropic diffusion image filter on scalar source field image...
Definition: fieldimageprocessing.hpp:202
 
int setLowerThreshold(double lowerValue)
Definition: fieldimageprocessing.hpp:666
 
FieldImagefilterThreshold createFieldImagefilterThreshold(const Field &sourceField)
Definition: fieldimageprocessing.hpp:817
 
A field performing ITK binary erode image filter on scalar source field image. 
Definition: fieldimageprocessing.hpp:57
 
double getLowerThreshold()
Definition: fieldimageprocessing.hpp:652
 
Image processing derived field type performing the ITK histogram field. 
Definition: fieldimageprocessing.hpp:302
 
A field performing ITK gradient magnitude recursive gaussian image filter on scalar source field imag...
Definition: fieldimageprocessing.hpp:466
 
int setComputeMinimumValues(int valuesCount, const double *valuesIn)
Definition: fieldimageprocessing.hpp:343
 
double getUpperThreshold()
Definition: fieldimageprocessing.hpp:121
 
Image processing derived field type performing the ITK binary threshold filter. 
Definition: fieldimageprocessing.hpp:80
 
A field performing ITK sigmoid image filter on scalar source field image. 
Definition: fieldimageprocessing.hpp:544
 
FieldImagefilterBinaryThreshold createFieldImagefilterBinaryThreshold(const Field &sourceField)
Definition: fieldimageprocessing.hpp:718
 
The OpenCMISS namespace. 
Definition: context.hpp:20
 
A field performing ITK rescale intensity image filter on scalar source field image. 
Definition: fieldimageprocessing.hpp:492
 
int getComputeMaximumValues(int valuesCount, double *valuesOut)
Definition: fieldimageprocessing.hpp:360
 
int setMarginalScale(double marginalScale)
Definition: fieldimageprocessing.hpp:449
 
FieldImagefilterGradientMagnitudeRecursiveGaussian createFieldImagefilterGradientMagnitudeRecursiveGaussian(const Field &sourceField, double sigma)
Definition: fieldimageprocessing.hpp:771
 
FieldImagefilterBinaryThreshold castImagefilterBinaryThreshold()
Definition: fieldimageprocessing.hpp:724
 
int setMaxKernelWidth(int maxKernelWidth)
Definition: fieldimageprocessing.hpp:288
 
FieldImagefilterSigmoid createFieldImagefilterSigmoid(const Field &sourceField, double min, double max, double alpha, double beta)
Definition: fieldimageprocessing.hpp:808
 
int getComputeMinimumValues(int valuesCount, double *valuesOut)
Definition: fieldimageprocessing.hpp:324
 
FieldImagefilterThreshold castImagefilterThreshold()
Definition: fieldimageprocessing.hpp:824